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stk3 serine/threonine kinase 3 (STE20 homolog, yeast) [ Danio rerio (zebrafish) ]

Gene ID: 324125, updated on 4-Jan-2025

Summary

Official Symbol
stk3provided by ZNC
Official Full Name
serine/threonine kinase 3 (STE20 homolog, yeast)provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-2845
See related
Ensembl:ENSDARG00000011312 AllianceGenome:ZFIN:ZDB-GENE-030131-2845
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:55383; wu:fc19e11
Summary
Predicted to enable protein serine/threonine kinase activity. Acts upstream of or within camera-type eye development. Predicted to be located in nucleus. Predicted to be active in cytoplasm. Orthologous to human STK3 (serine/threonine kinase 3). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See stk3 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (32807236..32820107)
105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (33220116..33232987)

Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene hippocalcin Neighboring gene 5'-nucleotidase, cytosolic IAa Neighboring gene uncharacterized LOC137488532 Neighboring gene si:dkey-284p5.3 Neighboring gene reactive intermediate imine deaminase A homolog

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein serine kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within apoptotic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within camera-type eye development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in hippo signaling ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in intracellular signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in negative regulation of canonical Wnt signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of apoptotic process IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within protein tetramerization IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of MAPK cascade IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
serine/threonine-protein kinase 3
Names
mst2
NP_955966.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199672.1NP_955966.1  serine/threonine-protein kinase 3

    See identical proteins and their annotated locations for NP_955966.1

    Status: PROVISIONAL

    Source sequence(s)
    BC048033
    UniProtKB/Swiss-Prot
    Q7ZUQ3
    UniProtKB/TrEMBL
    B2GP54
    Related
    ENSDARP00000015367.5, ENSDART00000008698.6
    Conserved Domains (3) summary
    cd06612
    Location:22277
    STKc_MST1_2; Catalytic domain of the Serine/Threonine Kinases, Mammalian STe20-like protein kinase 1 and 2
    smart00220
    Location:26277
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    pfam11629
    Location:438485
    Mst1_SARAH; C terminal SARAH domain of Mst1

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007130.7 Reference GRCz11 Primary Assembly

    Range
    32807236..32820107
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395055.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    265669..278189
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)