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AV1 coat protein [ Tomato leaf curl Madagascar virus-Menabe [Madagascar:Morondova:2001] ]

Gene ID: 3289553, updated on 18-Aug-2023

Summary

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Gene symbol
AV1
Gene description
coat protein
Locus tag
TLCMVgp2
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Tomato leaf curl Madagascar virus-Menabe [Madagascar:Morondova:2001] (isolate: Morondova, nat-host: Lycopersicon esculentum (tomato))
Lineage
Viruses; ssDNA viruses; Geminiviridae; Begomovirus
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Genomic context

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Sequence:
NC_006874.1 (297..1073)

NC_006874.1Genomic Context describing neighboring genes Neighboring gene AC2 Neighboring gene putative AV2 protein Neighboring gene replication enhancer protein Neighboring gene replication-associated protein Neighboring gene putative AC4 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006874.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. South West Indian Ocean islands tomato begomovirus populations represent a new major monopartite begomovirus group. Delatte H, et al. J Gen Virol, 2005 May. PMID 15831967

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
coat protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006874.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_213932.1 coat protein [Tomato leaf curl Madagascar virus-Menabe [Madagascar:Morondova:2001]]

    See identical proteins and their annotated locations for YP_213932.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q5DVC3, Q5DVC9
    Conserved Domains (1) summary
    pfam00844
    Location:18 → 258
    Gemini_coat; Geminivirus coat protein/nuclear export factor BR1 family
Nucleotide Protein
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Gene LinkOut

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