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D030040B21Rik RIKEN cDNA D030040B21 gene [ Mus musculus (house mouse) ]

Gene ID: 329101, updated on 8-Feb-2024

Summary

Official Symbol
D030040B21Rikprovided by MGI
Official Full Name
RIKEN cDNA D030040B21 geneprovided by MGI
Primary source
MGI:MGI:4437728
See related
Ensembl:ENSMUSG00000097744 AllianceGenome:MGI:4437728
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
D030040B21
Summary
Is expressed in spinal cord and ventral grey horn. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

See D030040B21Rik in Genome Data Viewer
Location:
1 A3; 1 5.1 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (16727776..16732502)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (16657552..16662278)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2W (putative) Neighboring gene STARR-positive B cell enhancer ABC_E4305 Neighboring gene STARR-positive B cell enhancer ABC_E5743 Neighboring gene elongin C Neighboring gene STARR-positive B cell enhancer ABC_E11065 Neighboring gene STARR-seq mESC enhancer starr_00340 Neighboring gene isopentenyl-diphosphate delta isomerase, pseudogene 5 Neighboring gene transmembrane protein 70

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_037998.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC157362
    Related
    ENSMUST00000181371.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    16727776..16732502
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)