U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

9130227L01Rik RIKEN cDNA 9130227L01 gene [ Mus musculus (house mouse) ]

Gene ID: 329159, updated on 22-Oct-2024

Summary

Official Symbol
9130227L01Rikprovided by MGI
Official Full Name
RIKEN cDNA 9130227L01 geneprovided by MGI
Primary source
MGI:MGI:2445084
See related
Ensembl:ENSMUSG00000099950 AllianceGenome:MGI:2445084
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See 9130227L01Rik in Genome Data Viewer
Location:
1 C1.3; 1 28.48 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (55970400..56011257)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (55931241..55972098)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene phospholipase C-like 1 Neighboring gene predicted gene, 39642 Neighboring gene STARR-seq mESC enhancer starr_00961 Neighboring gene STARR-seq mESC enhancer starr_00962 Neighboring gene predicted gene, 32949 Neighboring gene RIKEN cDNA 1700003I22 gene Neighboring gene VISTA enhancer mm613 Neighboring gene STARR-seq mESC enhancer starr_00963 Neighboring gene STARR-seq mESC enhancer starr_00964 Neighboring gene predicted gene, 53554

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045837.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK079812
    Related
    ENSMUST00000189293.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    55970400..56011257
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)