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fgfr1op2 FGFR1 oncogene partner 2 [ Danio rerio (zebrafish) ]

Gene ID: 335511, updated on 2-Nov-2024

Summary

Official Symbol
fgfr1op2provided by ZNC
Official Full Name
FGFR1 oncogene partner 2provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-7451
See related
Ensembl:ENSDARG00000009657 AllianceGenome:ZFIN:ZDB-GENE-030131-7451
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:64126; wu:fj17h04
Summary
Predicted to be involved in response to wounding. Predicted to be located in cytoplasm. Orthologous to human FGFR1OP2 (FGFR1 oncogene partner 2). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See fgfr1op2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (1722899..1730920)
105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (1873586..1881607)

Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene AT-rich interactive domain 2 Neighboring gene growth arrest-specific 2 like 3 Neighboring gene transmembrane 7 superfamily member 3 Neighboring gene mediator complex subunit 21

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by ZFIN

Process Evidence Code Pubs
involved_in response to wounding IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
FGFR1 oncogene partner 2 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199955.1NP_956249.1  FGFR1 oncogene partner 2 homolog

    See identical proteins and their annotated locations for NP_956249.1

    Status: PROVISIONAL

    Source sequence(s)
    BC053266
    UniProtKB/Swiss-Prot
    Q7T338
    Related
    ENSDARP00000005747.6, ENSDART00000021139.8
    Conserved Domains (1) summary
    pfam05769
    Location:2183
    DUF837; Protein of unknown function (DUF837)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007115.7 Reference GRCz11 Primary Assembly

    Range
    1722899..1730920
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)