s100v2 S100 calcium binding protein V2 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: s100v2provided by ZNC
Official Full Name: S100 calcium binding protein V2provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-8909
See related: Ensembl:ENSDARG00000070702 AllianceGenome:ZFIN:ZDB-GENE-030131-8909
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: s100v1; fk35d04; wu:fk35d04; si:dkey-78d16.1
Summary: Predicted to enable calcium ion binding activity and calcium-dependent protein binding activity. Predicted to be active in extracellular space and perinuclear region of cytoplasm. Is expressed in gill; gut; and hematopoietic system. Orthologous to several human genes including S100A13 (S100 calcium binding protein A13). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 19

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	19	NC_007130.7 (24263561..24267330, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	19	NC_007130.6 (24679338..24683107, complement)

Chromosome 19 - NC_007130.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables calcium ion binding	IBA Inferred from Biological aspect of Ancestor more info
enables calcium-dependent protein binding	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in extracellular space	IBA Inferred from Biological aspect of Ancestor more info
is_active_in perinuclear region of cytoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: S100 calcium binding protein V2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001080161.2 → NP_001073630.2 S100 calcium binding protein V2

See identical proteins and their annotated locations for NP_001073630.2

Status: PROVISIONAL

Source sequence(s)

BC134042

UniProtKB/TrEMBL

A3KNW4

Related

ENSDARP00000094858.2, ENSDART00000104083.5

Conserved Domains (1) summary

cd05022
Location:6 → 91

S-100A13; S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, ...