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hspbp1 HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [ Danio rerio (zebrafish) ]

Gene ID: 338155, updated on 12-Sep-2024

Summary

Official Symbol
hspbp1provided by ZNC
Official Full Name
HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-030219-55
See related
Ensembl:ENSDARG00000102937 AllianceGenome:ZFIN:ZDB-GENE-030219-55
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:55259; zgc:55260; id:ibd1110
Summary
Predicted to enable adenyl-nucleotide exchange factor activity. Is expressed in optic tectum and solid lens vesicle. Orthologous to human HSPBP1 (HSPA (Hsp70) binding protein 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (13600725..13618382)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (13450949..13468536)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108182805 Neighboring gene Tu translation elongation factor, mitochondrial Neighboring gene peptidoglycan recognition protein 6 Neighboring gene WIZ zinc finger b

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200075.2NP_956369.2  hsp70-binding protein 1

    Status: VALIDATED

    Source sequence(s)
    CU929085
    UniProtKB/TrEMBL
    Q98TS3
    Related
    ENSDARP00000136523.1, ENSDART00000162124.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    13600725..13618382
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)