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NANOGP9 Nanog homeobox pseudogene 9 [ Homo sapiens (human) ]

Gene ID: 349386, updated on 17-Jun-2024

Summary

Official Symbol
NANOGP9provided by HGNC
Official Full Name
Nanog homeobox pseudogene 9provided by HGNC
Primary source
HGNC:HGNC:23107
See related
AllianceGenome:HGNC:23107
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NANOGP6
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Genomic context

See NANOGP9 in Genome Data Viewer
Location:
Xq12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (65771763..65773832, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (64198237..64200306, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (64991605..64993674, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene FERM domain containing 8 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29714 Neighboring gene moesin Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20881 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20882 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29715 Neighboring gene ReSE screen-validated silencer GRCh37_chrX:64924017-64924189 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29716 Neighboring gene Sharpr-MPRA regulatory region 13592 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29717 Neighboring gene ReSE screen-validated silencer GRCh37_chrX:64972237-64972435 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20883 Neighboring gene eukaryotic translation termination factor 1 pseudogene 3 Neighboring gene cyclin Y like 5 (pseudogene)

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_004097.3 

    Range
    101..2170
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    65771763..65773832 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    64198237..64200306 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)