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CG13016 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36562, updated on 18-Sep-2024

Summary

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Official Symbol
CG13016provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0033899
Locus tag
Dmel_CG13016
See related
AllianceGenome:FB:FBgn0033899
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG13016; tmem39
Summary
Predicted to be active in membrane. Is expressed in organism. Orthologous to human TMEM39A (transmembrane protein 39A) and TMEM39B (transmembrane protein 39B). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See CG13016 in Genome Data Viewer
Location:
50E1-50E1; 2-69 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (14157762..14159434)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (10045267..10046939)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Reduction in Cnn dots 1 Neighboring gene peanuts Neighboring gene uncharacterized protein Neighboring gene Cysteinyl-tRNA synthetase, mitochondrial Neighboring gene O-fucosyltransferase 1 Neighboring gene eukaryotic translation initiation factor 3 subunit m

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The conserved transmembrane protein TMEM-39 coordinates with COPII to promote collagen secretion and regulate ER stress response. Zhang Z, et al. PLoS Genet, 2021 Feb. PMID 33524011, Free PMC Article
  2. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
  3. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
  4. A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function. Neely GG, et al. Cell, 2010 Apr 2. PMID 20371351, Free PMC Article
  5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG13016-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    14157762..14159434
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_137085.4 → NP_610929.2  uncharacterized protein Dmel_CG13016 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_610929.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1Z9L5, Q8SYY4
    Related
    FBpp0086648
    Conserved Domains (1) summary
    pfam10271
    Location:29 → 423
    Tmp39; Putative transmembrane protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1Z9L5 A1Z9L5
Q8SYY4 Q8SYY4

Gene LinkOut

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