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ORF1b RNA-dependent RNA polymerase [ Grapevine leafroll-associated virus 2 ]

Gene ID: 3707779, updated on 18-Aug-2023

Summary

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Gene symbol
ORF1b
Gene description
RNA-dependent RNA polymerase
Locus tag
GLRaV2_gp2
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Grapevine leafroll-associated virus 2 (isolate: 93/955)
Lineage
Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; Closterovirus
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Genomic context

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Sequence:
NC_007448.1 (8915..10294)

NC_007448.1Genomic Context describing neighboring genes Neighboring gene polyprotein Neighboring gene 6.3 kDa small hydrophobic protein Neighboring gene heat shock protein-70-like protein Neighboring gene 63 kDa protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007448.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequences and structures of two biologically distinct strains of Grapevine leafroll-associated virus 2 and sequence analysis. Meng B, et al. Virus Genes, 2005 Aug. PMID 15965606

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
RNA-dependent RNA polymerase
YP_337912.1
  • putatively translated through a +1 frameshift mechanism

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007448.1 Reference assembly

    Range
    8915..10294
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_337912.1 RNA-dependent RNA polymerase, partial [Grapevine leafroll-associated virus 2]

    See identical proteins and their annotated locations for YP_337912.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A4D6EA58, Q49IH2
    Conserved Domains (1) summary
    pfam00978
    Location:1 → 416
    RdRP_2; RNA dependent RNA polymerase
Nucleotide Protein
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