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ankrd27 ankyrin repeat domain 27 (VPS9 domain) [ Danio rerio (zebrafish) ]

Gene ID: 386887, updated on 4-Jan-2025

Summary

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Official Symbol
ankrd27provided by ZNC
Official Full Name
ankyrin repeat domain 27 (VPS9 domain)provided by ZNC
Primary source
ZFIN:ZDB-GENE-121105-1
See related
Ensembl:ENSDARG00000089207 AllianceGenome:ZFIN:ZDB-GENE-121105-1
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fc41e04; wu:fc41e04; si:ch211-113a14.30
Summary
Human ortholog(s) of this gene implicated in eosinophilic esophagitis. Orthologous to human ANKRD27 (ankyrin repeat domain 27). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
human mouse all
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Genomic context

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See ankrd27 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (36405028..36438703)
105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (35854389..35878884)

Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137489387 Neighboring gene si:ch211-113a14.28 Neighboring gene uncharacterized LOC103909891 Neighboring gene uncharacterized LOC110438397 Neighboring gene iroquois homeobox 3b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
ankyrin repeat domain-containing protein 27

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007136.7 Reference GRCz11 Primary Assembly

    Range
    36405028..36438703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021470747.2 → XP_021326422.2  ankyrin repeat domain-containing protein 27

    UniProtKB/TrEMBL
    A0A8M9PHH9
    Related
    ENSDARP00000110301.3, ENSDART00000124347.3
Nucleotide Protein Strain
Heading Accession and Version

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