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ANKRD20A11P ankyrin repeat domain 20 family member A11, pseudogene [ Homo sapiens (human) ]

Gene ID: 391267, updated on 22-Oct-2024

Summary

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Official Symbol
ANKRD20A11Pprovided by HGNC
Official Full Name
ankyrin repeat domain 20 family member A11, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:42024
See related
Ensembl:ENSG00000291280 AllianceGenome:HGNC:42024
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C21orf81
Expression
Low expression observed in reference dataset See more
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Genomic context

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See ANKRD20A11P in Genome Data Viewer
Location:
21q11.2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (13943769..13980444, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 21 NC_060945.1 (12287904..12324512, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (15316090..15352765, complement)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 18B pseudogene Neighboring gene ras homolog family member T1 pseudogene 2 Neighboring gene RNA, U6 small nuclear 954, pseudogene Neighboring gene Sharpr-MPRA regulatory region 4483 Neighboring gene neurofibromin 1 pseudogene 3 Neighboring gene protein phosphatase 6 regulatory subunit 2 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Nineteen additional unpredicted transcripts from human chromosome 21. Reymond A, et al. Genomics, 2002 Jun. PMID 12036297
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See Variation Viewer (GRCh37.p13)

General gene information

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Markers

Other Names

  • ankyrin repeat domain 20 family, member A3 pseudogene

Clone Names

  • MGC44241

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027270.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AF426257, AP001634
    Related
    ENST00000344693.6

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

    Range
    13943769..13980444 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060945.1 Alternate T2T-CHM13v2.0

    Range
    12287904..12324512 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_153750.1: Suppressed sequence

    Description
    NM_153750.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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