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paqr5a progestin and adipoQ receptor family member Va [ Danio rerio (zebrafish) ]

Gene ID: 393156, updated on 2-Nov-2024

Summary

Official Symbol
paqr5aprovided by ZNC
Official Full Name
progestin and adipoQ receptor family member Vaprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-867
See related
Ensembl:ENSDARG00000041145 AllianceGenome:ZFIN:ZDB-GENE-040426-867
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
paqr5; zgc:56016
Summary
Predicted to enable signaling receptor activity. Predicted to act upstream of or within oogenesis. Predicted to be located in membrane. Is expressed in hindbrain; olfactory placode; ovarian follicle stage IV; and peripheral olfactory organ. Orthologous to human PAQR5 (progestin and adipoQ receptor family member 5). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See paqr5a in Genome Data Viewer
Location:
chromosome: 18
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (20459888..20466061, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (20470822..20476995, complement)

Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene TLE family member 3, transcriptional corepressor a Neighboring gene kinesin family member 23 Neighboring gene protein FAM180A Neighboring gene damage-specific DNA binding protein 2

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Clone Names

  • MGC56016

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 
enables signaling receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables steroid binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within cell differentiation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within oogenesis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
membrane progestin receptor gamma-A
Names
mPR gamma-A
progestin and adipoQ receptor family member V-A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200187.1NP_956481.1  membrane progestin receptor gamma-A

    See identical proteins and their annotated locations for NP_956481.1

    Status: PROVISIONAL

    Source sequence(s)
    BC045864
    UniProtKB/Swiss-Prot
    Q1LUF6, Q7ZVH1
    Related
    ENSDARP00000060310.4, ENSDART00000060311.5
    Conserved Domains (1) summary
    pfam03006
    Location:44286
    HlyIII; Haemolysin-III related

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007129.7 Reference GRCz11 Primary Assembly

    Range
    20459888..20466061 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395022.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    53433..59606 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)