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prelid1a PRELI domain containing 1a [ Danio rerio (zebrafish) ]

Gene ID: 393337, updated on 2-Nov-2024

Summary

Official Symbol
prelid1aprovided by ZNC
Official Full Name
PRELI domain containing 1aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1341
See related
Ensembl:ENSDARG00000098671 AllianceGenome:ZFIN:ZDB-GENE-040426-1341
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
PX19; prelid1; zgc:64028
Summary
Predicted to enable phosphatidic acid transfer activity. Predicted to be involved in phospholipid transport. Predicted to be active in mitochondrial intermembrane space. Orthologous to human PRELID1 (PRELI domain containing 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See prelid1a in Genome Data Viewer
Location:
chromosome: 14
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (16034447..16044789)
105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (15728884..15739226)

Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 105 Neighboring gene neuropeptide Y receptor Y7 Neighboring gene MAX dimerization protein 3 Neighboring gene ring finger protein 103

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Clone Names

  • MGC64028

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables phosphatidic acid transfer activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in phospholipid transport IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in mitochondrial intermembrane space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrial intermembrane space IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
PRELI domain containing 1a
Names
PRELI domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200366.2NP_956660.1  PRELI domain containing 1a

    See identical proteins and their annotated locations for NP_956660.1

    Status: PROVISIONAL

    Source sequence(s)
    AY398403
    UniProtKB/TrEMBL
    A0A0R4IZC0, B2GTJ3, Q7T388
    Related
    ENSDARP00000141813.1, ENSDART00000161348.2
    Conserved Domains (1) summary
    pfam04707
    Location:16172
    PRELI; PRELI-like family

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007125.7 Reference GRCz11 Primary Assembly

    Range
    16034447..16044789
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)