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mif4gda MIF4G domain containing a [ Danio rerio (zebrafish) ]

Gene ID: 393355, updated on 2-Nov-2024

Summary

Official Symbol
mif4gdaprovided by ZNC
Official Full Name
MIF4G domain containing aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1382
See related
Ensembl:ENSDARG00000102080 AllianceGenome:ZFIN:ZDB-GENE-040426-1382
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:64152
Summary
Predicted to enable translation activator activity. Predicted to be involved in regulation of translational initiation. Predicted to act upstream of or within regulation of translation. Predicted to be located in cytoplasm and nucleus. Predicted to be active in cytosol. Orthologous to human MIF4GD (MIF4G domain containing). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See mif4gda in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (19334499..19341243, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (22863178..22869912, complement)

Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene small ubiquitin like modifier 2a Neighboring gene golgi associated, gamma adaptin ear containing, ARF binding protein 3a Neighboring gene growth factor receptor-bound protein 2a Neighboring gene melanin-concentrating hormone receptor 1a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Clone Names

  • MGC64152

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables translation activator activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of translation IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of translational initiation IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
MIF4G domain-containing protein A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200384.1NP_956678.1  MIF4G domain-containing protein A

    See identical proteins and their annotated locations for NP_956678.1

    Status: PROVISIONAL

    Source sequence(s)
    BC053283
    UniProtKB/Swiss-Prot
    B0UXU6, Q7T324
    Related
    ENSDARP00000135400.1, ENSDART00000167674.2
    Conserved Domains (1) summary
    cl02652
    Location:15198
    MIF4G; MIF4G domain

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007117.7 Reference GRCz11 Primary Assembly

    Range
    19334499..19341243 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005166179.5XP_005166236.3  MIF4G domain-containing protein A isoform X1

    UniProtKB/Swiss-Prot
    B0UXU6, Q7T324
    UniProtKB/TrEMBL
    A0A8M2BDK1

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394638.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    9211..15834 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395253.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    9211..15834 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)