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zgc:77880 zgc:77880 [ Danio rerio (zebrafish) ]

Gene ID: 393865, updated on 4-Jan-2025

Summary

Official Symbol
zgc:77880provided by ZNC
Official Full Name
zgc:77880provided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1901
See related
Ensembl:ENSDARG00000030563 AllianceGenome:ZFIN:ZDB-GENE-040426-1901
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in protein targeting to membrane. Predicted to be located in membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See zgc:77880 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (10305652..10315206)
105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (9621541..9631095)

Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137495431 Neighboring gene eukaryotic translation initiation factor 3, subunit F Neighboring gene phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1b Neighboring gene FERM domain-containing protein 7

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Clone Names

  • MGC77880

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein-cysteine S-palmitoyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein-cysteine S-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in protein targeting to membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
zf-DHHC domain-containing protein
NP_957185.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200891.1NP_957185.1  zf-DHHC domain-containing protein

    See identical proteins and their annotated locations for NP_957185.1

    Status: PREDICTED

    Source sequence(s)
    BC063990
    UniProtKB/TrEMBL
    A0A8M1PDM8, Q6P3H1
    Related
    ENSDARP00000043880.6, ENSDART00000043881.7
    Conserved Domains (2) summary
    pfam01529
    Location:103235
    zf-DHHC; DHHC palmitoyltransferase
    cl19890
    Location:12164
    zf-DHHC; DHHC palmitoyltransferase

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007112.7 Reference GRCz11 Primary Assembly

    Range
    10305652..10315206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)