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gpr19 G protein-coupled receptor 19 [ Danio rerio (zebrafish) ]

Gene ID: 393969, updated on 2-Nov-2024

Summary

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Official Symbol
gpr19provided by ZNC
Official Full Name
G protein-coupled receptor 19provided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1295
See related
Ensembl:ENSDARG00000102226 AllianceGenome:ZFIN:ZDB-GENE-040426-1295
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:63912
Summary
Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human GPR19 (G protein-coupled receptor 19). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
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Genomic context

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See gpr19 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (126435..133552, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (135921..141049)

Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene dual specificity phosphatase 16 Neighboring gene cAMP responsive element binding protein-like 2 Neighboring gene TANK-binding kinase 1 Neighboring gene EGFR pathway substrate 8a, signaling adaptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. The transcription factor, Nuclear factor, erythroid 2 (Nfe2), is a regulator of the oxidative stress response during Danio rerio development. Williams LM, et al. Aquat Toxicol, 2016 Nov. PMID 27716579, Free PMC Article
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC63912

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within signal transduction IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
probable G-protein coupled receptor 19

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200994.1 → NP_957288.1  probable G-protein coupled receptor 19

    See identical proteins and their annotated locations for NP_957288.1

    Status: PROVISIONAL

    Source sequence(s)
    BC053145
    UniProtKB/TrEMBL
    A0A8N1Z332, Q7T3E9
    Related
    ENSDARP00000136455.1, ENSDART00000171845.3
    Conserved Domains (2) summary
    pfam00001
    Location:80 → 299
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:70 → 257
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007115.7 Reference GRCz11 Primary Assembly

    Range
    126435..133552 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_011010878.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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