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FDJ16_gp089 HNH endonuclease [ Pseudomonas phage nickie ]

Gene ID: 40097399, updated on 11-Jan-2023

Summary

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Gene symbol
FDJ16_gp089
Gene description
HNH endonuclease
Locus tag
FDJ16_gp089
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas phage nickie (nat-host: Pseudomonas syringae pv. avii)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Nickievirus; Nickievirus nickie
Old locus tag
CNR34_00076
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Genomic context

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Sequence:
NC_042091.1 (68026..68556)

NC_042091.1Genomic Context describing neighboring genes Neighboring gene calcineurin-like phosphoesterase Neighboring gene exonuclease Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene RuvC-like Holliday junction resolvase Neighboring gene ribonucleotide reductase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042091.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
HNH endonuclease

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_042091.1 Reference assembly

    Range
    68026..68556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009620743.1 HNH endonuclease [Pseudomonas phage nickie]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2H4P763
    Conserved Domains (2) summary
    pfam07463
    Location:3 → 40
    NUMOD4; NUMOD4 motif
    cl00083
    Location:68 → 112
    HNHc; HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and ...
Nucleotide Protein
Heading Accession and Version

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