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LPP LIM domain containing preferred translocation partner in lipoma [ Homo sapiens (human) ]

Gene ID: 4026, updated on 26-Nov-2024

Summary

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Official Symbol
LPPprovided by HGNC
Official Full Name
LIM domain containing preferred translocation partner in lipomaprovided by HGNC
Primary source
HGNC:HGNC:6679
See related
Ensembl:ENSG00000145012 MIM:600700; AllianceGenome:HGNC:6679
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
This gene encodes a member of a subfamily of LIM domain proteins that are characterized by an N-terminal proline-rich region and three C-terminal LIM domains. The encoded protein localizes to the cell periphery in focal adhesions and may be involved in cell-cell adhesion and cell motility. This protein also shuttles through the nucleus and may function as a transcriptional co-activator. This gene is located at the junction of certain disease-related chromosomal translocations, which result in the expression of chimeric proteins that may promote tumor growth. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2014]
Expression
Ubiquitous expression in endometrium (RPKM 14.7), esophagus (RPKM 14.3) and 24 other tissues See more
Orthologs
mouse all
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Genomic context

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See LPP in Genome Data Viewer
Location:
3q27.3-q28
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (188153021..188890671)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (190970544..191707297)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (187870809..188608460)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20974 Neighboring gene Sharpr-MPRA regulatory region 2895 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr3:187707584-187708117 Neighboring gene uncharacterized LOC107986166 Neighboring gene long intergenic non-protein coding RNA 1991 Neighboring gene Sharpr-MPRA regulatory region 1686 Neighboring gene Sharpr-MPRA regulatory region 10187 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:187769983-187770955 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr3:187870480-187871380 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14995 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:187873180-187874078 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr3:187882030-187883229 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:187897095-187897707 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20975 Neighboring gene LPP antisense RNA 2 Neighboring gene uncharacterized LOC401105 Neighboring gene Sharpr-MPRA regulatory region 910 Neighboring gene uncharacterized LOC124906316 Neighboring gene LPP antisense RNA 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:188353620-188354172 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:188354173-188354724 Neighboring gene microRNA 28 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14996 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:188600153-188600654 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:188600655-188601154 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:188618060-188619259 Neighboring gene Sharpr-MPRA regulatory region 14211 Neighboring gene NANOG hESC enhancer GRCh37_chr3:188655166-188655667 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:188655787-188656288 Neighboring gene Sharpr-MPRA regulatory region 11355 Neighboring gene NANOG hESC enhancer GRCh37_chr3:188674939-188675473 Neighboring gene TPRG1 antisense RNA 1 Neighboring gene ENOPH1 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Contribution of LPP copy number and sequence changes to esophageal atresia, tracheoesophageal fistula, and VACTERL association. Hernández-García A, et al. Am J Med Genet A, 2012 Jul. PMID 22639458
  2. LPP, a LIM protein highly expressed in smooth muscle. Gorenne I, et al. Am J Physiol Cell Physiol, 2003 Sep. PMID 12760907
  3. 3'UTR SNPs in the LPP gene associated with Immunoglobulin A nephropathy risk in the Chinese Han population. Feng Y, et al. Int Immunopharmacol, 2019 Sep. PMID 31295688
  4. Zyxin and paxillin proteins: focal adhesion plaque LIM domain proteins go nuclear. Wang Y, et al. Biochim Biophys Acta, 2003 Feb 17. PMID 12581855
  5. Single nucleotide polymorphism in the 3' untranslated region of LPP is a risk factor for lung cancer: a case-control study. Yan S, et al. BMC Cancer, 2019 Jan 8. PMID 30621612, Free PMC Article

See all (139) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Association of LPP and ZMIZ1 Gene Polymorphism with Celiac Disease in Subjects from Punjab, Pakistan.
    Title: Association of LPP and ZMIZ1 Gene Polymorphism with Celiac Disease in Subjects from Punjab, Pakistan.
  2. Replication of association at the LPP and UBASH3A loci in a UK autoimmune Addison's disease cohort.
    Title: Replication of association at the LPP and UBASH3A loci in a UK autoimmune Addison's disease cohort.
  3. LPP polymorphisms are risk factors for allergic rhinitis in the Chinese Han population.
    Title: LPP polymorphisms are risk factors for allergic rhinitis in the Chinese Han population.
  4. Case Report: Identification of Potential Prognosis-Related TP53 Mutation and BCL6-LPP Fusion in Primary Pituitary Lymphoma by Next Generation Sequencing: Two Cases.
    Title: Case Report: Identification of Potential Prognosis-Related TP53 Mutation and BCL6-LPP Fusion in Primary Pituitary Lymphoma by Next Generation Sequencing: Two Cases.
  5. LPP rs2378456 CC genotype increased the risk of astrocytoma.
    Title: LPP and RYR2 Gene Polymorphisms Correlate with the Risk and the Prognosis of Astrocytoma.
  6. The results of the stratified analysis showed that LPP SNPs rs3796283 and rs2378456 in the Chinese Han population were connected with susceptibility to Immunoglobulin A nephropathy (IgAN) in different subgroups. Our data may provide new evidence to research the etiology of IgAN.
    Title: 3'UTR SNPs in the LPP gene associated with Immunoglobulin A nephropathy risk in the Chinese Han population.
  7. cancer-associated fibroblasts regulate endothelial LPP via a calcium-dependent signaling pathway involving microfibrillar-associated protein 5 (MFAP5), focal adhesion kinase (FAK), ERK, and LPP
    Title: Cancer-associated fibroblasts regulate endothelial adhesion protein LPP to promote ovarian cancer chemoresistance.
  8. Our results provides evidence for the impact of LPP polymorphisms on the susceptibility to lung cancer in Chinese population
    Title: Single nucleotide polymorphism in the 3' untranslated region of LPP is a risk factor for lung cancer: a case-control study.
  9. Data indicate a function for lipoma preferred partner (LPP) in the formation of invadopodia and a requirement for LPP in mediating the metastatic ability of breast cancer cells.
    Title: LPP is a Src substrate required for invadopodia formation and efficient breast cancer lung metastasis.
  10. This is the first report of epigenetic regulation of the intronic miR-28-5p expression by promoter DNA methylation of its host gene, LPP.
    Title: Epigenetic silencing of LPP/miR-28 in multiple myeloma.
Submit: New GeneRIF Correction See all GeneRIFs (33)

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

EBI GWAS Catalog

Description
A genome-wide association meta-analysis of self-reported allergy identifies shared and allergy-specific susceptibility loci.
EBI GWAS Catalog
A genome-wide association study of plasma total IgE concentrations in the Framingham Heart Study.
EBI GWAS Catalog
Association analyses identify three susceptibility Loci for vitiligo in the Chinese Han population.
EBI GWAS Catalog
Familial young-onset diabetes, pre-diabetes and cardiovascular disease are associated with genetic variants of DACH1 in Chinese.
EBI GWAS Catalog
Genome-wide analysis of polymorphisms associated with cytokine responses in smallpox vaccine recipients.
EBI GWAS Catalog
Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
EBI GWAS Catalog
Genome-wide Association Study Identifies Five Susceptibility Loci for Follicular Lymphoma outside the HLA Region.
EBI GWAS Catalog
Genome-wide association study of B cell non-Hodgkin lymphoma identifies 3q27 as a susceptibility locus in the Chinese population.
EBI GWAS Catalog
Genome-wide meta-analysis identifies variants associated with platinating agent susceptibility across populations
EBI GWAS Catalog
Genome-wide trans-ancestry meta-analysis provides insight into the genetic architecture of type 2 diabetes susceptibility.
EBI GWAS Catalog
Linkage and genome-wide association analysis of obesity-related phenotypes: association of weight with the MGAT1 gene.
EBI GWAS Catalog
Meta-analysis identifies multiple loci associated with kidney function-related traits in east Asian populations.
EBI GWAS Catalog
Meta-analysis of genome-wide association studies identifies ten loci influencing allergic sensitization.
EBI GWAS Catalog
Multiple common variants for celiac disease influencing immune gene expression.
EBI GWAS Catalog
Newly identified genetic risk variants for celiac disease related to the immune response.
EBI GWAS Catalog
Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
EBI GWAS Catalog
Variant of TYR and autoimmunity susceptibility loci in generalized vitiligo.
EBI GWAS Catalog
White matter integrity as an intermediate phenotype: exploratory genome-wide association analysis in individuals at high risk of bipolar disorder.
EBI GWAS Catalog

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

HIV-1 interactions

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Replication interactions

Interaction Pubs
Knockdown of LIM domain containing preferred translocation partner in lipoma (LPP) by siRNA enhances HIV-1 replication in CD4+/CCR5+/CXCR4+ TZM-bl HeLa cells PubMed

Go to the HIV-1, Human Interaction Database

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
  
located_in focal adhesion HDA PubMed 
is_active_in focal adhesion IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in focal adhesion IDA
Inferred from Direct Assay
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in stress fiber IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
lipoma-preferred partner
Names
LIM protein
lipoma preferred partner

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_016932.2 RefSeqGene

    Range
    5283..741797
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001167671.3 → NP_001161143.1  lipoma-preferred partner isoform a

    See identical proteins and their annotated locations for NP_001161143.1

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  2. NM_001167672.3 → NP_001161144.1  lipoma-preferred partner isoform b

    See identical proteins and their annotated locations for NP_001161144.1

    Status: REVIEWED

    Source sequence(s)
    AC009319, AI126032, AK304035, AW301088, CD697098, KF510228
    UniProtKB/TrEMBL
    B7Z8W0
    Conserved Domains (3) summary
    cd09350
    Location:269 → 322
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:329 → 381
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cl02475
    Location:389 → 454
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

  3. NM_001375455.1 → NP_001362384.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  4. NM_001375456.1 → NP_001362385.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  5. NM_001375457.1 → NP_001362386.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  6. NM_001375458.1 → NP_001362387.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Related
    ENSP00000392667.2, ENST00000414139.6
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  7. NM_001375459.1 → NP_001362388.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  8. NM_001375460.1 → NP_001362389.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  9. NM_001375461.1 → NP_001362390.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  10. NM_001375462.1 → NP_001362391.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Related
    ENSP00000478901.1, ENST00000617246.5
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  11. NM_001375463.1 → NP_001362392.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  12. NM_001375464.1 → NP_001362393.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  13. NM_001375465.1 → NP_001362394.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Related
    ENSP00000405138.2, ENST00000420410.6
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  14. NM_001387663.1 → NP_001374592.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  15. NM_001387664.1 → NP_001374593.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  16. NM_001387665.1 → NP_001374594.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  17. NM_001387666.1 → NP_001374595.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  18. NM_001387667.1 → NP_001374596.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  19. NM_001387668.1 → NP_001374597.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  20. NM_001387669.1 → NP_001374598.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  21. NM_001387670.1 → NP_001374599.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  22. NM_001387671.1 → NP_001374600.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  23. NM_001387672.1 → NP_001374601.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  24. NM_001387673.1 → NP_001374602.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  25. NM_001387674.1 → NP_001374603.1  lipoma-preferred partner isoform a

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  26. NM_001387675.1 → NP_001374604.1  lipoma-preferred partner isoform c

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC055711, AC063932, KF510228
    UniProtKB/TrEMBL
    B7Z871
    Conserved Domains (4) summary
    cd09350
    Location:253 → 306
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:313 → 365
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PRK14086
    Location:28 → 217
    dnaA; chromosomal replication initiator protein DnaA
    cl02475
    Location:373 → 438
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

  27. NM_001387676.1 → NP_001374605.1  lipoma-preferred partner isoform c

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC055711, AC063932, KF510228
    UniProtKB/TrEMBL
    B7Z871
    Conserved Domains (4) summary
    cd09350
    Location:253 → 306
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:313 → 365
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PRK14086
    Location:28 → 217
    dnaA; chromosomal replication initiator protein DnaA
    cl02475
    Location:373 → 438
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

  28. NM_001387677.1 → NP_001374606.1  lipoma-preferred partner isoform d

    Status: REVIEWED

    Source sequence(s)
    AC022498, AC063932, AC069226, AC117507
    UniProtKB/TrEMBL
    C9JUT4
    Conserved Domains (2) summary
    PRK14086
    Location:191 → 370
    dnaA; chromosomal replication initiator protein DnaA
    PRK14971
    Location:141 → 219
    PRK14971; DNA polymerase III subunit gamma/tau

  29. NM_001387678.1 → NP_001374607.1  lipoma-preferred partner isoform d

    Status: REVIEWED

    Source sequence(s)
    AC022498, AC063932, AC069226, AC117507
    UniProtKB/TrEMBL
    C9JUT4
    Conserved Domains (2) summary
    PRK14086
    Location:191 → 370
    dnaA; chromosomal replication initiator protein DnaA
    PRK14971
    Location:141 → 219
    PRK14971; DNA polymerase III subunit gamma/tau

  30. NM_001387679.1 → NP_001374608.1  lipoma-preferred partner isoform d

    Status: REVIEWED

    Source sequence(s)
    AC022498, AC063932, AC069226, AC117507
    UniProtKB/TrEMBL
    C9JUT4
    Conserved Domains (2) summary
    PRK14086
    Location:191 → 370
    dnaA; chromosomal replication initiator protein DnaA
    PRK14971
    Location:141 → 219
    PRK14971; DNA polymerase III subunit gamma/tau

  31. NM_001387680.1 → NP_001374609.1  lipoma-preferred partner isoform d

    Status: REVIEWED

    Source sequence(s)
    AC022498, AC063932, AC069226, AC117507
    UniProtKB/TrEMBL
    C9JUT4
    Conserved Domains (2) summary
    PRK14086
    Location:191 → 370
    dnaA; chromosomal replication initiator protein DnaA
    PRK14971
    Location:141 → 219
    PRK14971; DNA polymerase III subunit gamma/tau

  32. NM_001387681.1 → NP_001374610.1  lipoma-preferred partner isoform d

    Status: REVIEWED

    Source sequence(s)
    AC022498, AC063932, AC069226, AC117507
    UniProtKB/TrEMBL
    C9JUT4
    Conserved Domains (2) summary
    PRK14086
    Location:191 → 370
    dnaA; chromosomal replication initiator protein DnaA
    PRK14971
    Location:141 → 219
    PRK14971; DNA polymerase III subunit gamma/tau

  33. NM_001387682.1 → NP_001374611.1  lipoma-preferred partner isoform d

    Status: REVIEWED

    Source sequence(s)
    AC022498, AC063932, AC069226, AC117507
    UniProtKB/TrEMBL
    C9JUT4
    Conserved Domains (2) summary
    PRK14086
    Location:191 → 370
    dnaA; chromosomal replication initiator protein DnaA
    PRK14971
    Location:141 → 219
    PRK14971; DNA polymerase III subunit gamma/tau

  34. NM_001387683.1 → NP_001374612.1  lipoma-preferred partner isoform d

    Status: REVIEWED

    Source sequence(s)
    AC022498, AC063932, AC069226
    UniProtKB/TrEMBL
    C9JUT4
    Conserved Domains (2) summary
    PRK14086
    Location:191 → 370
    dnaA; chromosomal replication initiator protein DnaA
    PRK14971
    Location:141 → 219
    PRK14971; DNA polymerase III subunit gamma/tau

  35. NM_005578.5 → NP_005569.1  lipoma-preferred partner isoform a

    See identical proteins and their annotated locations for NP_005569.1

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
    Consensus CDS
    CCDS3291.1
    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Related
    ENSP00000482617.2, ENST00000618621.5
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

RNA

  1. NR_164692.1 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    188153021..188890671
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047448103.1 → XP_047304059.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  2. XM_047448109.1 → XP_047304065.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  3. XM_047448102.1 → XP_047304058.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  4. XM_047448112.1 → XP_047304068.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  5. XM_047448107.1 → XP_047304063.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  6. XM_047448115.1 → XP_047304071.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  7. XM_047448105.1 → XP_047304061.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  8. XM_047448097.1 → XP_047304053.1  lipoma-preferred partner isoform X1

  9. XM_047448099.1 → XP_047304055.1  lipoma-preferred partner isoform X4

  10. XM_047448104.1 → XP_047304060.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  11. XM_047448108.1 → XP_047304064.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  12. XM_047448114.1 → XP_047304070.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  13. XM_047448106.1 → XP_047304062.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  14. XM_047448113.1 → XP_047304069.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  15. XM_047448111.1 → XP_047304067.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  16. XM_047448101.1 → XP_047304057.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  17. XM_047448110.1 → XP_047304066.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  18. XM_047448098.1 → XP_047304054.1  lipoma-preferred partner isoform X2

  19. XM_017006378.2 → XP_016861867.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052
    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:416 → 469
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:476 → 528
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:536 → 601
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    PHA03247
    Location:19 → 388
    PHA03247; large tegument protein UL36; Provisional

  20. XM_047448116.1 → XP_047304072.1  lipoma-preferred partner isoform X7

  21. XM_017006381.1 → XP_016861870.1  lipoma-preferred partner isoform X8

    UniProtKB/TrEMBL
    C9JUT4
    Related
    ENSP00000393602.1, ENST00000448637.5
    Conserved Domains (2) summary
    PRK14086
    Location:191 → 380
    dnaA; chromosomal replication initiation protein; Provisional
    PRK14971
    Location:141 → 219
    PRK14971; DNA polymerase III subunits gamma and tau; Provisional

  22. XM_011512823.3 → XP_011511125.1  lipoma-preferred partner isoform X3

    UniProtKB/TrEMBL
    B7ZLW0
    Conserved Domains (4) summary
    cd09350
    Location:441 → 494
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09356
    Location:501 → 553
    LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09436
    Location:561 → 626
    LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cl23807
    Location:229 → 316
    WWbp; WW-domain ligand protein

  23. XM_047448100.1 → XP_047304056.1  lipoma-preferred partner isoform X5

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    190970544..191707297
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054346494.1 → XP_054202469.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  2. XM_054346500.1 → XP_054202475.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  3. XM_054346493.1 → XP_054202468.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  4. XM_054346502.1 → XP_054202477.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  5. XM_054346498.1 → XP_054202473.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  6. XM_054346505.1 → XP_054202480.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  7. XM_054346496.1 → XP_054202471.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  8. XM_054346487.1 → XP_054202462.1  lipoma-preferred partner isoform X1

  9. XM_054346490.1 → XP_054202465.1  lipoma-preferred partner isoform X4

  10. XM_054346495.1 → XP_054202470.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  11. XM_054346499.1 → XP_054202474.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  12. XM_054346504.1 → XP_054202479.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  13. XM_054346497.1 → XP_054202472.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  14. XM_054346503.1 → XP_054202478.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  15. XM_054346501.1 → XP_054202476.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  16. XM_054346492.1 → XP_054202467.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  17. XM_054346488.1 → XP_054202463.1  lipoma-preferred partner isoform X2

  18. XM_054346507.1 → XP_054202482.1  lipoma-preferred partner isoform X6

    UniProtKB/Swiss-Prot
    A1L4L6, D3DNV6, Q8NFX5, Q93052

  19. XM_054346506.1 → XP_054202481.1  lipoma-preferred partner isoform X7

  20. XM_054346508.1 → XP_054202483.1  lipoma-preferred partner isoform X8

  21. XM_054346489.1 → XP_054202464.1  lipoma-preferred partner isoform X3

  22. XM_054346491.1 → XP_054202466.1  lipoma-preferred partner isoform X5

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q93052.1 GenPept UniProtKB/Swiss-Prot:Q93052

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