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LOC402715 karyopherin subunit alpha 2 pseudogene [ Homo sapiens (human) ]

Gene ID: 402715, updated on 17-Sep-2024

Summary

Gene symbol
LOC402715
Gene description
karyopherin subunit alpha 2 pseudogene
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See LOC402715 in Genome Data Viewer
Location:
7q35
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (145010053..145011254)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (146190781..146191982)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (144707146..144708347)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375552 Neighboring gene EI24 pseudogene 4 Neighboring gene ribosomal protein L7 pseudogene 59 Neighboring gene NANOG hESC enhancer GRCh37_chr7:144782351-144782852 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:144880176-144881375 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:144921770-144922322 Neighboring gene MPRA-validated peak6814 silencer Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr7:145115119-145116318 Neighboring gene MPRA-validated peak6815 silencer Neighboring gene MPRA-validated peak6816 silencer Neighboring gene DPY19L4 pseudogene 2

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_007552.3 

    Range
    101..1302
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    145010053..145011254
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    146190781..146191982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001045546.1: Suppressed sequence

    Description
    NM_001045546.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.