emc8 ER membrane protein complex subunit 8 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: emc8provided by ZNC
Official Full Name: ER membrane protein complex subunit 8provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-2692
See related: Ensembl:ENSDARG00000017093 AllianceGenome:ZFIN:ZDB-GENE-040426-2692
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: noc4; cox4nb; fb54g02; zgc:56331; wu:fb54g02
Summary: Predicted to be part of EMC complex. Is expressed in pigment cell. Orthologous to human EMC8 (ER membrane protein complex subunit 8). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 18

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	18	NC_007129.7 (30500690..30504652, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	18	NC_007129.6 (30522436..30526398, complement)

Chromosome 18 - NC_007129.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

AI477029 (e-PCR)
- UniSTS:206534

fb54g02.x1 (e-PCR)
- UniSTS:190711

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
part_of EMC complex	IBA Inferred from Biological aspect of Ancestor more info
part_of EMC complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: ER membrane protein complex subunit 8

Names: cox4 neighbor; neighbor of cox4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_213370.1 → NP_998535.1 ER membrane protein complex subunit 8

See identical proteins and their annotated locations for NP_998535.1

Status: PROVISIONAL

Source sequence(s)

BC046080

UniProtKB/TrEMBL

A0A8M1PPT0, Q7ZUY2

Related

ENSDARP00000013605.4, ENSDART00000028033.6

Conserved Domains (1) summary

cd08060
Location:5 → 191

MPN_UPF0172; Mov34/MPN/PAD-1 family: UPF0172 family of unknown function includes neighbor of COX4 (Noc4p)