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EXJ42_gp1 hypothetical polyprotein [ Diatom colony associated ssRNA virus 1 ]

Gene ID: 41700516, updated on 1-Aug-2022

Summary

Gene symbol
EXJ42_gp1
Gene description
hypothetical polyprotein
Locus tag
EXJ42_gp1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Diatom colony associated ssRNA virus 1
Lineage
Viruses; Riboviria; Flaviviridae
Old locus tag
RVD_040
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Genomic context

Sequence:
NC_040589.1 (19..11259)

NC_040589.1Genomic Context describing neighboring genes

General protein information

Preferred Names
hypothetical polyprotein
YP_009552082.1
  • containing putative helicase and putative RNA-dependent RNA polymerase domains

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_040589.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009552082.1 hypothetical polyprotein [Diatom colony associated ssRNA virus 1]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A146J6H5
    Conserved Domains (3) summary
    smart00487
    Location:386519
    DEXDc; DEAD-like helicases superfamily
    COG1643
    Location:608671
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    cl02808
    Location:24902754
    RT_like; Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, retroviruses, group ...