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EXK77_gp1 1a/1b [ Blackcurrant leafroll-associated virus 1 ]

Gene ID: 41702508, updated on 2-Aug-2022

Summary

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Gene symbol
EXK77_gp1
Gene description
1a/1b
Locus tag
EXK77_gp1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Blackcurrant leafroll-associated virus 1 (isolate: BC28074, nat-host: Ribes nigrum)
Lineage
Viruses; Riboviria; Closteroviridae; Closterovirus; unclassified Closterovirus
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Genomic context

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Sequence:
NC_040722.1 (103..10045)

NC_040722.1Genomic Context describing neighboring genes Neighboring gene p6 Neighboring gene HSP70h Neighboring gene HSP90

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040722.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular Characterization of Divergent Closterovirus Isolates Infecting Ribes Species. Koloniuk I, et al. Viruses, 2018 Jul 12. PMID 30002359, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
1a/1b

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_040722.1 Reference assembly

    Range
    103..10045
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009553246.1 1a/1b [Blackcurrant leafroll-associated virus 1]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A385MD31
    Conserved Domains (4) summary
    pfam05533
    Location:634 → 719
    Peptidase_C42; Beet yellows virus-type papain-like endopeptidase C42
    pfam00978
    Location:2812 → 3255
    RdRP_2; RNA dependent RNA polymerase
    pfam01443
    Location:2462 → 2726
    Viral_helicase1; Viral (Superfamily 1) RNA helicase
    pfam01660
    Location:779 → 1113
    Vmethyltransf; Viral methyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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