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LOC4324200 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4324200, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4324200
Gene description
protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1
Locus tag
OSNPB_010582600
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (23178307..23180359)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (22604512..22606679)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9272369 Neighboring gene peptidyl-prolyl cis-trans isomerase CYP57 Neighboring gene probable protein phosphatase 2C 6 Neighboring gene UBP1-associated proteins 1C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1
Names
B1097D05.32
Os01g0582600

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    23178307..23180359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015766812.3 → XP_015622298.1  protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1

    UniProtKB/TrEMBL
    A0A0N7KD80, A0A9K3Y731, B9EXQ7, Q8LJ71
    Conserved Domains (1) summary
    pfam13359
    Location:339 → 496
    DDE_Tnp_4; DDE superfamily endonuclease
Nucleotide Protein
Heading Accession and Version

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