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LOC4324294 uncharacterized LOC4324294 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4324294, updated on 10-Oct-2024

Summary

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Gene symbol
LOC4324294
Gene description
uncharacterized LOC4324294
Locus tag
OSNPB_010974300
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4324294 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (43702463..43712230, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (43049185..43058998, complement)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene outer envelope pore protein 16, chloroplastic Neighboring gene metallothionein-like protein 2B Neighboring gene probable E3 ubiquitin-protein ligase XBOS31 Neighboring gene pectin acetylesterase 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC4324294
Names
Os01g0974300

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    43702463..43712230 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066310732.1 → XP_066166829.1  uncharacterized protein LOC4324294 isoform X2

  2. XM_026022505.2 → XP_025878290.1  uncharacterized protein LOC4324294 isoform X2

    UniProtKB/TrEMBL
    A3A211
    Conserved Domains (1) summary
    cl00644
    Location:13 → 60
    F420_ligase; F420-0:Gamma-glutamyl ligase

  3. XM_066310738.1 → XP_066166835.1  uncharacterized protein LOC4324294 isoform X2

  4. XM_066310728.1 → XP_066166825.1  uncharacterized protein LOC4324294 isoform X2

  5. XM_015765479.3 → XP_015620965.1  uncharacterized protein LOC4324294 isoform X1

    UniProtKB/TrEMBL
    A3A211
    Conserved Domains (1) summary
    PRK13294
    Location:13 → 60
    PRK13294; F420-0--gamma-glutamyl ligase; Provisional

  6. XM_015765477.3 → XP_015620963.1  uncharacterized protein LOC4324294 isoform X1

    UniProtKB/TrEMBL
    A3A211
    Conserved Domains (1) summary
    PRK13294
    Location:13 → 60
    PRK13294; F420-0--gamma-glutamyl ligase; Provisional

  7. XM_015765478.3 → XP_015620964.1  uncharacterized protein LOC4324294 isoform X1

    UniProtKB/TrEMBL
    A3A211
    Conserved Domains (1) summary
    PRK13294
    Location:13 → 60
    PRK13294; F420-0--gamma-glutamyl ligase; Provisional

  8. XM_015765475.3 → XP_015620961.1  uncharacterized protein LOC4324294 isoform X1

    UniProtKB/TrEMBL
    A3A211
    Conserved Domains (1) summary
    PRK13294
    Location:13 → 60
    PRK13294; F420-0--gamma-glutamyl ligase; Provisional

  9. XM_015765476.3 → XP_015620962.1  uncharacterized protein LOC4324294 isoform X1

    UniProtKB/TrEMBL
    A3A211
    Conserved Domains (1) summary
    PRK13294
    Location:13 → 60
    PRK13294; F420-0--gamma-glutamyl ligase; Provisional

  10. XM_015765474.3 → XP_015620960.1  uncharacterized protein LOC4324294 isoform X1

    UniProtKB/TrEMBL
    A3A211
    Conserved Domains (1) summary
    PRK13294
    Location:13 → 60
    PRK13294; F420-0--gamma-glutamyl ligase; Provisional
Nucleotide Protein
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