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LOC4325073 protein BOLA2 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4325073, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4325073
Gene description
protein BOLA2
Locus tag
OSNPB_010866600
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4325073 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (38153648..38154444, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (37525929..37527239, complement)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene VAMP-like protein YKT61 Neighboring gene fructose-1,6-bisphosphatase, cytosolic Neighboring gene soluble inorganic pyrophosphatase Neighboring gene sm-like protein LSM3A Neighboring gene tubby-like F-box protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2 iron, 2 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein maturation by iron-sulfur cluster transfer IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein BOLA2
Names
BolA-like protein
Os01g0866600
P0505D12.38

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    38153648..38154444 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015786018.3 → XP_015641504.1  protein BOLA2

    UniProtKB/TrEMBL
    A2WXB4, A2ZZX8, Q5N9F3
    Conserved Domains (1) summary
    pfam01722
    Location:28 → 79
    BolA; BolA-like protein
Nucleotide Protein
Heading Accession and Version

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