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LOC4326275 uncharacterized LOC4326275 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4326275, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4326275
Gene description
uncharacterized LOC4326275
Gene type
ncRNA
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Expression
Ubiquitous expression in roots before flowering (RPKM 8.4), roots after flowering (RPKM 8.1) and 6 other tissues See more
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Genomic context

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See LOC4326275 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (14242352..14244536)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (14197285..14199514)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase 4 Neighboring gene AP-3 complex subunit sigma Neighboring gene salt stress-induced protein Neighboring gene uncharacterized LOC107281141

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    14242352..14244536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_010738902.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials