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LOC4326333 putative receptor protein kinase ZmPK1 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4326333, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4326333
Gene description
putative receptor protein kinase ZmPK1
Locus tag
OSNPB_010670100
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4326333 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (28061186..28064070, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (27474044..27476911, complement)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene putative receptor protein kinase ZmPK1 Neighboring gene uncharacterized LOC112936162 Neighboring gene putative receptor protein kinase ZmPK1 Neighboring gene uncharacterized LOC112936164

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in recognition of pollen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative receptor protein kinase ZmPK1
Names
Os01g0670100
P0047F09.19
receptor protein kinase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    28061186..28064070 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015787333.3 → XP_015642819.1  putative receptor protein kinase ZmPK1

    UniProtKB/TrEMBL
    A0A0P0V6B5, A2WTM1, A2ZWD9, Q0JKJ3
    Conserved Domains (4) summary
    cd01098
    Location:330 → 414
    PAN_AP_plant; Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and ...
    pfam00954
    Location:252 → 311
    S_locus_glycop; S-locus glycoprotein domain
    pfam01453
    Location:83 → 173
    B_lectin; D-mannose binding lectin
    cl21453
    Location:524 → 801
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
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