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LOC4326526 uncharacterized LOC4326526 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4326526, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4326526
Gene description
uncharacterized LOC4326526
Locus tag
OSNPB_010936700
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
P0504E02.1
Expression
Biased expression in flower buds (RPKM 24.1) and flowers (RPKM 3.4) See more
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (41756305..41759348, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (41112109..41116234, complement)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene lipase Neighboring gene uncharacterized LOC112937622 Neighboring gene uncharacterized LOC9272650 Neighboring gene uncharacterized LOC9271510 Neighboring gene vesicle-associated protein 2-2 Neighboring gene chitinase CLP-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC4326526
Names
FK506-binding protein 5
Os01g0936700
putative glutamic acid-rich protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    41756305..41759348 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015765143.3 → XP_015620629.1  uncharacterized protein LOC4326526 isoform X2

  2. XM_015765137.3 → XP_015620623.1  uncharacterized protein LOC4326526 isoform X1

  3. XM_066306767.1 → XP_066162864.1  uncharacterized protein LOC4326526 isoform X3

Nucleotide Protein
Heading Accession and Version

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