U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC4327270 uncharacterized LOC4327270 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4327270, updated on 13-Jul-2024

Summary

Go to the top of the page Help
Gene symbol
LOC4327270
Gene description
uncharacterized LOC4327270
Locus tag
OSNPB_010318400
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Expression
Biased expression in milk grains (RPKM 3.0), flowers (RPKM 1.4) and 3 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC4327270 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (12133293..12135407)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (12090883..12093705)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene caffeoylshikimate esterase Neighboring gene caffeoylshikimate esterase Neighboring gene protein ABC transporter 1, mitochondrial Neighboring gene transfer RNA histidin (anticodon GUG)

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein LOC4327270
Names
B1153F04.11
Os01g0318400
P0028G04.35

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    12133293..12135407
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026025069.2 → XP_025880854.1  uncharacterized protein LOC4327270

    UniProtKB/TrEMBL
    Q7F1C0, Q94D75
    Conserved Domains (1) summary
    cl23759
    Location:119 → 229
    GT1; myb-like, SANT family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials