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LOC4328943 putative disease resistance protein RGA4 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4328943, updated on 17-Jul-2024

Summary

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Gene symbol
LOC4328943
Gene description
putative disease resistance protein RGA4
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4328943 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (9182800..9183979)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (9155586..9166122)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein phosphatase 7 long form homolog Neighboring gene disease resistance protein L6 Neighboring gene putative disease resistance protein At3g14460 Neighboring gene uncharacterized LOC136355477

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to fungus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative disease resistance protein RGA4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    9182800..9183979
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026022987.2 → XP_025878772.2  putative disease resistance protein RGA4

Nucleotide Protein
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