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LOC4329723 ent-cassadiene C11-alpha-hydroxylase 1-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4329723, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4329723
Gene description
ent-cassadiene C11-alpha-hydroxylase 1-like
Locus tag
OSNPB_020569900
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4329723 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (22220816..22222494)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (21740286..21741994)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136355071 Neighboring gene oryzalexin D synthase-like Neighboring gene uncharacterized LOC107279928 Neighboring gene ent-cassa-12,15-diene synthase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. CYP76M7 is an ent-cassadiene C11alpha-hydroxylase defining a second multifunctional diterpenoid biosynthetic gene cluster in rice. Swaminathan S, et al. Plant Cell, 2009 Oct. PMID 19825834, Free PMC Article
  2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. CYP76M7 is an ent-cassadiene C11alpha-hydroxylase defining a second multifunctional diterpenoid biosynthetic gene cluster in rice.
    Title: CYP76M7 is an ent-cassadiene C11alpha-hydroxylase defining a second multifunctional diterpenoid biosynthetic gene cluster in rice.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ent-cassadiene C11-alpha-hydroxylase 1-like
Names
OSJNBa0008E01.17
Os02g0569900
P0025F02.46
putative Cyt-P450 monooxygenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    22220816..22222494
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015768107.3 → XP_015623593.1  ent-cassadiene C11-alpha-hydroxylase 1-like

    UniProtKB/TrEMBL
    A2X6A0, A3A869, Q6YTE2, Q6YV99
    Conserved Domains (1) summary
    cd11073
    Location:62 → 495
    CYP76-like; cytochrome P450 family 76 and similar cytochrome P450s
Nucleotide Protein
Heading Accession and Version

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