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LOC4330226 14 kDa proline-rich protein DC2.15 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4330226, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4330226
Gene description
14 kDa proline-rich protein DC2.15
Locus tag
OSNPB_020662000
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
RCc3; OJ1001_D02.1
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Genomic context

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See LOC4330226 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (27291314..27292167)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (26804972..26805823)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene probable lipid phosphate phosphatase beta Neighboring gene vesicle-associated protein 1-3 Neighboring gene putative lipid-binding protein AIR1 Neighboring gene uncharacterized LOC4330228

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of a rice gene family encoding root-specific proteins. Xu Y, et al. Plant Mol Biol, 1995 Jan. PMID 7888615
  2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
14 kDa proline-rich protein DC2.15
Names
Os02g0662000
P0516F12.19
root-specific protein RCc3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    27291314..27292167
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015767586.3 → XP_015623072.1  14 kDa proline-rich protein DC2.15

    UniProtKB/TrEMBL
    A2X812, Q0DYX4, Q40721, Q6EUJ6, Q6H6L9
    Conserved Domains (1) summary
    cd01958
    Location:49 → 133
    HPS_like; Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins. In addition to HPS, members ...
Nucleotide Protein
Heading Accession and Version

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