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LOC4330267 ASI1-immunoprecipitated protein 1 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4330267, updated on 1-Aug-2024

Summary

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Gene symbol
LOC4330267
Gene description
ASI1-immunoprecipitated protein 1
Locus tag
OSNPB_020669700
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1725_H08.33
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Genomic context

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See LOC4330267 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (27674470..27678343, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (27188019..27191978, complement)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene dehydrin DHN1-like Neighboring gene uncharacterized LOC4330266 Neighboring gene protein ALTERED PHOSPHATE STARVATION RESPONSE 1 Neighboring gene protein LAZ1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ASI1-immunoprecipitated protein 1
Names
Os02g0669700
P0684A08.19

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    27674470..27678343 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066308074.1 → XP_066164171.1  ASI1-immunoprecipitated protein 1 isoform X2

    UniProtKB/TrEMBL
    Q0DYT3, Q6ESQ6

  2. XM_015768753.3 → XP_015624239.1  ASI1-immunoprecipitated protein 1 isoform X1

    Conserved Domains (1) summary
    cd00590
    Location:29 → 100
    RRM_SF; RNA recognition motif (RRM) superfamily

  3. XM_015768754.3 → XP_015624240.1  ASI1-immunoprecipitated protein 1 isoform X2

    UniProtKB/TrEMBL
    Q0DYT3, Q6ESQ6
    Conserved Domains (1) summary
    cd00590
    Location:22 → 93
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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