U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC4330627 3-ketoacyl-CoA synthase 6 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4330627, updated on 12-Jul-2024

Summary

Go to the top of the page Help
Gene symbol
LOC4330627
Gene description
3-ketoacyl-CoA synthase 6
Locus tag
OSNPB_020731900
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC4330627 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (30995036..30997157)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (30500158..30502355)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene protein CURVATURE THYLAKOID 1A, chloroplastic Neighboring gene zinc finger protein CONSTANS-LIKE 16 Neighboring gene uncharacterized LOC136355290 Neighboring gene U-box domain-containing protein 11

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
3-ketoacyl-CoA synthase 6
Names
Os02g0731900
P0617A09.38
P0643A10.10
putative very-long-chain fatty acid condensing enzyme CUT1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    30995036..30997157
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015768056.3 → XP_015623542.1  3-ketoacyl-CoA synthase 6

    UniProtKB/TrEMBL
    A0A0N7KG16, A0A5S6R8J6, A3AB20, Q0DXV1, Q6Z2K7
    Conserved Domains (1) summary
    PLN02377
    Location:72 → 479
    PLN02377; 3-ketoacyl-CoA synthase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials