U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC4333170 cysteine proteinase inhibitor 8-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4333170, updated on 16-Jul-2024

Summary

Go to the top of the page Help
Gene symbol
LOC4333170
Gene description
cysteine proteinase inhibitor 8-like
Locus tag
OSNPB_030429000
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OC-VIII; OsJ_11358
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC4333170 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (18406196..18407045)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (17949262..17950065)

Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene expansin-A31-like Neighboring gene uncharacterized LOC4333169 Neighboring gene xanthine dehydrogenase-like Neighboring gene uncharacterized LOC9266376

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cysteine proteinase inhibitor 8
Names
LOC_Os03g31510
Oryzacystatin VIII
Oryzacystatin-8

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001417852.1 → NP_001404781.1  cysteine proteinase inhibitor 8 precursor

    Status: VALIDATED

    Source sequence(s)
    CI243073, CI253361, CI656810
    UniProtKB/Swiss-Prot
    A3AJC3, Q10J94
    UniProtKB/TrEMBL
    A2XI86

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

    Range
    18406196..18407045
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q10J94.1 GenPept UniProtKB/Swiss-Prot:Q10J94

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials