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LOC4334759 ALBINO3-like protein 1, chloroplastic [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4334759, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4334759
Gene description
ALBINO3-like protein 1, chloroplastic
Locus tag
OSNPB_030844700
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4334759 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (36484400..36490473)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (35511302..35517369)

Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' Neighboring gene GDSL esterase/lipase At3g48460 Neighboring gene uncharacterized LOC4334760 Neighboring gene uncharacterized LOC112936007 Neighboring gene uncharacterized LOC4334761

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables membrane insertase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein insertion into membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to chloroplast IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in thylakoid membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast thylakoid membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ALBINO3-like protein 1, chloroplastic
Names
Os03g0844700

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

    Range
    36484400..36490473
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015775673.3 → XP_015631159.1  ALBINO3-like protein 1, chloroplastic isoform X2

    UniProtKB/TrEMBL
    A2XNZ3, Q10AQ4, Q75LC5
    Conserved Domains (1) summary
    pfam02096
    Location:127 → 341
    60KD_IMP; 60Kd inner membrane protein

  2. XM_015775672.3 → XP_015631158.1  ALBINO3-like protein 1, chloroplastic isoform X1

    UniProtKB/TrEMBL
    A0A8J8YKH3, A2XNZ3, B9F7J8, Q10AQ5
    Conserved Domains (1) summary
    pfam02096
    Location:127 → 341
    60KD_IMP; 60Kd inner membrane protein
Nucleotide Protein
Heading Accession and Version

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