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LOC4336649 thioredoxin-like 3-3 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4336649, updated on 16-Jul-2024

Summary

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Gene symbol
LOC4336649
Gene description
thioredoxin-like 3-3
Locus tag
OSNPB_040560200
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OsJ_15765
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Genomic context

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See LOC4336649 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (28570375..28572271)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (28064997..28066977)

Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene probable aquaporin PIP1-2 Neighboring gene mitogen-activated protein kinase kinase kinase YODA Neighboring gene cytochrome P450 86A8 Neighboring gene Flavin-containing amine oxidase domain-containing protein 3 Neighboring gene Alpha-L-fucosidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
thioredoxin-like 3-3
Names
LOC_Os04g47260
OSJNBa0084K11.5
Thioredoxin-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001419754.1 → NP_001406683.1  thioredoxin-like 3-3

    Status: VALIDATED

    Source sequence(s)
    CF281405, CF281406, CV724947, CV724948
    UniProtKB/Swiss-Prot
    A0A0P0WDF0, Q0JB29, Q7XSQ7
    UniProtKB/TrEMBL
    B8ASX2, Q01H91

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

    Range
    28570375..28572271
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7XSQ7.2 GenPept UniProtKB/Swiss-Prot:Q7XSQ7

Gene LinkOut

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Molecular Biology Databases
Research Materials