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LOC4337083 zinc finger BED domain-containing protein RICESLEEPER 1-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4337083, updated on 12-Jul-2024

Summary

Gene symbol
LOC4337083
Gene description
zinc finger BED domain-containing protein RICESLEEPER 1-like
Locus tag
OSNPB_040628400
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

See LOC4337083 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (32484959..32488807, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (31977254..31981153, complement)

Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene peroxidase 1-like Neighboring gene NDR1/HIN1-like protein 13 Neighboring gene uncharacterized LOC4337084 Neighboring gene cyclin-P1-1

Genomic regions, transcripts, and products

General protein information

Preferred Names
zinc finger BED domain-containing protein RICESLEEPER 1-like
Names
Os04g0628400

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

    Range
    32484959..32488807 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026024851.2XP_025880636.1  zinc finger BED domain-containing protein RICESLEEPER 1-like

    UniProtKB/TrEMBL
    A0A0P0WFF3, B8AUU1, Q00RK0, Q0J9W3, Q7XN74
    Conserved Domains (3) summary
    smart00614
    Location:4792
    ZnF_BED; BED zinc finger
    pfam05699
    Location:728810
    Dimer_Tnp_hAT; hAT family C-terminal dimerization region
    pfam14372
    Location:586685
    DUF4413; Domain of unknown function (DUF4413)
  2. XM_015780471.3XP_015635957.1  zinc finger BED domain-containing protein RICESLEEPER 1-like

    UniProtKB/TrEMBL
    A0A0P0WFF3, B8AUU1, Q00RK0, Q0J9W3, Q7XN74
    Conserved Domains (3) summary
    smart00614
    Location:4792
    ZnF_BED; BED zinc finger
    pfam05699
    Location:728810
    Dimer_Tnp_hAT; hAT family C-terminal dimerization region
    pfam14372
    Location:586685
    DUF4413; Domain of unknown function (DUF4413)
  3. XM_015780470.2XP_015635956.1  zinc finger BED domain-containing protein RICESLEEPER 1-like

    UniProtKB/TrEMBL
    A0A0P0WFF3, B8AUU1, Q00RK0, Q0J9W3, Q7XN74
    Conserved Domains (3) summary
    smart00614
    Location:4792
    ZnF_BED; BED zinc finger
    pfam05699
    Location:728810
    Dimer_Tnp_hAT; hAT family C-terminal dimerization region
    pfam14372
    Location:586685
    DUF4413; Domain of unknown function (DUF4413)
  4. XM_026024852.2XP_025880637.1  zinc finger BED domain-containing protein RICESLEEPER 1-like

    UniProtKB/TrEMBL
    A0A0P0WFF3, B8AUU1, Q00RK0, Q0J9W3, Q7XN74
    Conserved Domains (3) summary
    smart00614
    Location:4792
    ZnF_BED; BED zinc finger
    pfam05699
    Location:728810
    Dimer_Tnp_hAT; hAT family C-terminal dimerization region
    pfam14372
    Location:586685
    DUF4413; Domain of unknown function (DUF4413)