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LOC4337923 uncharacterized LOC4337923 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4337923, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4337923
Gene description
uncharacterized LOC4337923
Locus tag
OSNPB_050168400
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Expression
Ubiquitous expression in leaves after flowering (RPKM 25.3), flower buds (RPKM 25.2) and 6 other tissues See more
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Genomic context

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Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (4121472..4124613)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (4102582..4105902)

Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107280906 Neighboring gene uncharacterized LOC4337921 Neighboring gene 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic Neighboring gene transmembrane 9 superfamily member 12 Neighboring gene UDP-xylose transporter 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC4337923
Names
Os05g0168400

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

    Range
    4121472..4124613
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015782109.3 → XP_015637595.1  uncharacterized protein LOC4337923

    UniProtKB/TrEMBL
    A0A0P0WIE2, B8AYG7, B9FHR2, Q60DU1
Nucleotide Protein
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