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LOC4338179 serine/threonine-protein kinase AGC1-7 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4338179, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4338179
Gene description
serine/threonine-protein kinase AGC1-7
Locus tag
OSNPB_050237400
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4338179 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (8412652..8416261)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (8378810..8382529)

Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene cyclin-A1-4-like Neighboring gene cytochrome b561 and DOMON domain-containing protein At3g61750 Neighboring gene achilleol B synthase-like Neighboring gene uncharacterized LOC136356467 Neighboring gene lysine histidine transporter 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase AGC1-7
Names
Os05g0237400

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

    Range
    8412652..8416261
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015783308.3 → XP_015638794.1  serine/threonine-protein kinase AGC1-7

    UniProtKB/TrEMBL
    A2Y266, Q60EU6, Q6F344
    Conserved Domains (1) summary
    cd05574
    Location:164 → 525
    STKc_phototropin_like; Catalytic domain of Phototropin-like Serine/Threonine Kinases

  2. XM_015783309.3 → XP_015638795.1  serine/threonine-protein kinase AGC1-7

    UniProtKB/TrEMBL
    A2Y266, Q60EU6, Q6F344
    Conserved Domains (1) summary
    cd05574
    Location:164 → 525
    STKc_phototropin_like; Catalytic domain of Phototropin-like Serine/Threonine Kinases
Nucleotide Protein
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