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LOC4338668 protein RETICULATA-RELATED 4, chloroplastic [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4338668, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4338668
Gene description
protein RETICULATA-RELATED 4, chloroplastic
Locus tag
OSNPB_050388600
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4338668 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (18897834..18903319)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (18796414..18802002)

Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene putative NAD kinase 3 Neighboring gene large ribosomal subunit protein uL1c Neighboring gene AP2-like ethylene-responsive transcription factor At2g41710 Neighboring gene uncharacterized LOC136356710

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
protein RETICULATA-RELATED 4, chloroplastic
Names
Os05g0388600

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

    Range
    18897834..18903319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015781937.3 → XP_015637423.1  protein RETICULATA-RELATED 4, chloroplastic

    UniProtKB/TrEMBL
    B9FI22, Q60E58
    Conserved Domains (1) summary
    pfam11891
    Location:155 → 332
    RETICULATA-like; Protein RETICULATA-related
Nucleotide Protein
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