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LOC4340476 tuliposide A-converting enzyme 1, chloroplastic [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4340476, updated on 17-Jul-2024

Summary

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Gene symbol
LOC4340476
Gene description
tuliposide A-converting enzyme 1, chloroplastic
Locus tag
OSNPB_060214300
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
P0537F07.9
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Genomic context

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See LOC4340476 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (5980416..5981644)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (5813073..5815197)

Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4340474 Neighboring gene uncharacterized LOC4340475 Neighboring gene uncharacterized LOC136356904 Neighboring gene uncharacterized LOC107281244

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tuliposide A-converting enzyme 1, chloroplastic
Names
Os06g0214300
P0701E03.48
putative PrMC3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

    Range
    5980416..5981644
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015786281.3 → XP_015641767.1  tuliposide A-converting enzyme 1, chloroplastic

    UniProtKB/TrEMBL
    A0A0P0WU88, A3B9M3, Q69Y21
    Conserved Domains (1) summary
    pfam07859
    Location:78 → 300
    Abhydrolase_3; alpha/beta hydrolase fold
Nucleotide Protein
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