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LOC4343303 uncharacterized LOC4343303 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4343303, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4343303
Gene description
uncharacterized LOC4343303
Locus tag
OSNPB_070498300
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1197_D06.113
Expression
Ubiquitous expression in flowers (RPKM 124.6), flower buds (RPKM 106.3) and 6 other tissues See more
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Genomic context

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See LOC4343303 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (18910052..18913322)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (18684472..18687841)

Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene myb-related protein Hv33 Neighboring gene uncharacterized LOC107281537 Neighboring gene LRR receptor-like serine/threonine-protein kinase GSO1 Neighboring gene ubiquitin-like domain-containing protein CIP73

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC4343303
Names
Os07g0498300
P0005E02.120

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

    Range
    18910052..18913322
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015789603.3 → XP_015645089.1  uncharacterized protein LOC4343303

    UniProtKB/TrEMBL
    B8B6E0, B9FXD5, Q0D6A0, Q7XIF7
    Conserved Domains (1) summary
    PLN02806
    Location:1 → 81
    PLN02806; complex I subunit
Nucleotide Protein
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