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LOC4343788 MFP1 attachment factor 1 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4343788, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4343788
Gene description
MFP1 attachment factor 1
Locus tag
OSNPB_070593332
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1710_H11.119
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Genomic context

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See LOC4343788 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (24401913..24402694)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (24177296..24178274)

Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4343787 Neighboring gene uncharacterized LOC107278381 Neighboring gene vesicle transport protein GOT1 Neighboring gene uncharacterized LOC9268029

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in lateral root development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MFP1 attachment factor 1
Names
Os07g0593332
putative MFP1 attachment factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

    Range
    24401913..24402694
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015789710.3 → XP_015645196.1  MFP1 attachment factor 1

    UniProtKB/TrEMBL
    Q0D4Z3
    Conserved Domains (1) summary
    pfam13943
    Location:44 → 137
    WPP; WPP domain
Nucleotide Protein
Heading Accession and Version

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