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LOC4344163 rho GTPase-activating protein 7 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4344163, updated on 10-Oct-2024

Summary

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Gene symbol
LOC4344163
Gene description
rho GTPase-activating protein 7
Locus tag
OSNPB_070658300
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1477_F01.111-1; OJ1477_F01.111-2
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Genomic context

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See LOC4344163 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (27940766..27950272)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (27713059..27722663)

Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4344161 Neighboring gene small ribosomal subunit protein uS9m Neighboring gene ferredoxin-dependent glutamate synthase, chloroplastic-like Neighboring gene aspartyl protease 25-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho GTPase-activating protein 7
Names
Os07g0658300
P0047B07.132-1
P0047B07.132-2
pleckstrin homology (PH) domain-containing protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001403229.1 → NP_001390158.1  rho GTPase-activating protein 7 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AK103870, CI231589
    UniProtKB/TrEMBL
    B9FUN4, Q0D3Z0

  2. NM_001403230.1 → NP_001390159.1  rho GTPase-activating protein 7 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AK058967, AK103870, CI231589
    UniProtKB/TrEMBL
    Q69RJ1

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

    Range
    27940766..27950272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066312002.1 → XP_066168099.1  rho GTPase-activating protein 7 isoform X1

  2. XM_066312003.1 → XP_066168100.1  rho GTPase-activating protein 7 isoform X2

Nucleotide Protein
Heading Accession and Version

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