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LOC4344652 uncharacterized LOC4344652 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4344652, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4344652
Gene description
uncharacterized LOC4344652
Locus tag
OSNPB_080144400
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4344652 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (2520117..2527369, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (2507283..2514532, complement)

Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene transcription factor MYBS3-like Neighboring gene probable calcium-binding protein CML32 Neighboring gene uncharacterized LOC112939877 Neighboring gene uncharacterized LOC112939890

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC4344652
Names
Os08g0144400
P0571B09.106-1
P0665F09.120-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

    Range
    2520117..2527369 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026027589.2 → XP_025883374.1  uncharacterized protein LOC4344652

    UniProtKB/TrEMBL
    A0A0N7KP97, B9FZ15, Q7EYD8
    Conserved Domains (2) summary
    PRK10942
    Location:273 → 433
    PRK10942; serine endoprotease DegP
    pfam13365
    Location:206 → 349
    Trypsin_2; Trypsin-like peptidase domain

RNA

  1. XR_003243839.2 RNA Sequence

  2. XR_010734467.1 RNA Sequence

Nucleotide Protein
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