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LOC4345148 early nodulin-like protein 9 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4345148, updated on 13-Jul-2024

Summary

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Gene symbol
LOC4345148
Gene description
early nodulin-like protein 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1014_B05.5
Expression
Biased expression in flowers (RPKM 5.4), flower buds (RPKM 5.2) and 2 other tissues See more
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Genomic context

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See LOC4345148 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (10565403..10566519)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (10508109..10509237)

Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136351531 Neighboring gene uncharacterized LOC107281838 Neighboring gene uncharacterized LOC136351532 Neighboring gene uncharacterized LOC136351475

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
early nodulin-like protein 9
Names
OSJNBa0053M06.38
early nodulin-like protein 3
putative phytocyanin-related protein Pn14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

    Range
    10565403..10566519
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015793916.3 → XP_015649402.1  early nodulin-like protein 9

    UniProtKB/TrEMBL
    A2YTB2, A3BRE9, Q6Z4W7
    Conserved Domains (1) summary
    cd11019
    Location:37 → 130
    OsENODL1_like; Early nodulin-like protein (OsENODL1) and similar proteins
Nucleotide Protein
Heading Accession and Version

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