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LOC4345961 uncharacterized LOC4345961 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4345961, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4345961
Gene description
uncharacterized LOC4345961
Locus tag
OSNPB_080502600
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1506_F01.9; OJ1345_D02.37
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Genomic context

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Location:
chromosome: 8
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (24972712..24973350)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (24826993..24828517)

Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene protein ENHANCED DOWNY MILDEW 2 Neighboring gene fasciclin-like arabinogalactan protein 7 Neighboring gene serine--glyoxylate aminotransferase Neighboring gene uncharacterized LOC136351439

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC4345961
Names
Os08g0502600
calcium-binding EF-hand family protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

    Range
    24972712..24973350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015794124.3 → XP_015649610.1  uncharacterized protein LOC4345961

    UniProtKB/TrEMBL
    A0A0P0XHD3, A2YWR5, Q6ZFI7, Q6ZJZ4
    Conserved Domains (1) summary
    pfam13499
    Location:28 → 98
    EF-hand_7; EF-hand domain pair
Nucleotide Protein
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