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LOC4346289 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4346289, updated on 13-Jul-2024

Summary

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Gene symbol
LOC4346289
Gene description
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B
Locus tag
OSNPB_080556600
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1150_A11.14
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Genomic context

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See LOC4346289 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (28004078..28005701)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (27856776..27858463)

Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene probable protein S-acyltransferase 19 Neighboring gene peroxisomal ATPase PEX1 Neighboring gene phosphatidylinositol-3-phosphatase myotubularin-1 Neighboring gene transfer RNA arginine (anticodon CCG)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial respiratory chain complex I assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B
Names
Os08g0556600
putative fiber protein Fb14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

    Range
    28004078..28005701
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015794785.3 → XP_015650271.1  NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B

    UniProtKB/TrEMBL
    A2YY10, A3BVP0, Q0J3S4, Q6ZJ19
    Conserved Domains (1) summary
    pfam10200
    Location:10 → 66
    Ndufs5; NADH:ubiquinone oxidoreductase, NDUFS5-15kDa
Nucleotide Protein
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